Pharmacogenetics in clinical practice: a systematic review

Authors

DOI:

https://doi.org/10.62451/rep.v4i3.206

Keywords:

Pharmacogenetics, precision medicine, personalized dosing, therapeutic efficacy, omic sciences

Abstract

Pharmacogenetics is a key omics discipline within precision personalized medicine that aims to analyze genetic variability to optimize drug therapy. This study sought to describe the main clinical applications and actionability of gene–drug pairs supported by the highest level of scientific evidence. A qualitative systematic review was conducted following the PRISMA statement, considering the recommendations and guidelines developed by the Clinical Pharmacogenetics Implementation Consortium (CPIC), the Dutch Pharmacogenetics Working Group (DPWG), and the PharmGKB database. The review identified 50 pharmacogenes with high clinical evidence associated with the optimization of 152 medications used in cardiology, psychiatry, oncology, infectious diseases, and other medical specialties. The principal clinical applications include the precise selection of medications, individualized adjustment of initial and maintenance doses through Activity Scores, identification of therapeutic failures associated with ultrarapid metabolizer phenotypes, and support for the preclinical development of novel molecular targets. The reviewed evidence also highlights the advantages of preemptive genotyping over the traditional trial-and-error prescribing approach, although challenges remain regarding the phenotypic standardization of certain alleles and the limited representation of ethnic diversity in commercial pharmacogenetic panels. Overall, the findings indicate that the systematic integration of pharmacogenetics into clinical practice, supported by clinical decision-support systems, promotes the transition from reactive prescribing to a predictive, precise, and personalized therapeutic strategy.

References

Abdullah-Koolmees, H., van Keulen, A. M., Nijenhuis, M., & Deneer, V. H. M. (2021). Pharmacogenetics guidelines: Overview and comparison of the DPWG, CPIC, CPNDS, and RNPGx guidelines. Frontiers in Pharmacology, 11, 595219. https://doi.org/10.3389/fphar.2020.595219

Alshabeeb, M. A., Alyabsi, M., Aziz, M. A., & Abohelaika, S. (2022). Pharmacogenes that demonstrate high association evidence according to CPIC, DPWG, and PharmGKB. Frontiers in Medicine, 9, 1001876. https://doi.org/10.3389/fmed.2022.1001876

Bernal Ruiz, M. L. (2024). Evolución de la farmacogenética y la farmacogenómica. Actualidad en Farmacología y Terapéutica, 22(3), 177–201. https://dialnet.unirioja.es/servlet/articulo?codigo=9877176&orden=0&info=link

Cacabelos, R., Naidoo, V., Corzo, L., Cacabelos, N., & Carril, J. C. (2021). Genophenotypic factors and pharmacogenomics in adverse drug reactions. International Journal of Molecular Sciences, 22(24), 13302. https://doi.org/10.3390/ijms222413302

Capilla Díaz, S., & Gamero de Luna, E. J. (2024). Farmacogenética en atención primaria: Una herramienta para prevenir reacciones adversas a medicamentos clínicamente relevantes. Medicina de Familia. SEMERGEN, 50(6), 102273. https://doi.org/10.1016/j.semerg.2024.102273

Caudle, K. E., Sangkuhl, K., Whirl-Carrillo, M., Swen, J. J., Haidar, C. E., Klein, T. E., Gammal, R. S., Relling, M. V., Scott, S. A., Hertz, D. L., Guchelaar, H., & Gaedigk, A. (2020). Standardizing CYP2D6 genotype to phenotype translation: Consensus recommendations from the Clinical Pharmacogenetics Implementation Consortium and Dutch Pharmacogenetics Working Group. Clinical and Translational Science, 13(1), 116–124. https://doi.org/10.1111/cts.12692

Cooper-DeHoff, R. M., Niemi, M., Ramsey, L. B., Luzum, J. A., Tarkiainen, E. K., Straka, R. J., Gong, L., Tuteja, S., Wilke, R. A., Wadelius, M., Larson, E. A., Roden, D. M., Klein, T. E., Yee, S. W., Krauss, R. M., Turner, R. M., Palaniappan, L., Gaedigk, A., Giacomini, K. M., Caudle, K. E., & Voora, D. (2022). The Clinical Pharmacogenetics Implementation Consortium guideline for SLCO1B1, ABCG2, and CYP2C9 genotypes and statin-associated musculoskeletal symptoms. Clinical Pharmacology & Therapeutics, 111(5), 1007–1021. https://doi.org/10.1002/cpt.2557

Crews, K. R., Monte, A. A., Huddart, R., Caudle, K. E., Kharasch, E. D., Gaedigk, A., Dunnenberger, H. M., Leeder, J. S., Callaghan, J. T., Samer, C. F., Klein, T. E., Haidar, C. E., van Driest, S. L., Ruano, G., Sangkuhl, K., Cavallari, L. H., Müller, D. J., Prows, C. A., Nagy, M., Somogyi, A. A., & Skaar, T. C. (2021). Clinical Pharmacogenetics Implementation Consortium guideline for CYP2D6, OPRM1, and COMT genotypes and select opioid therapy. Clinical Pharmacology & Therapeutics, 110(4), 888–896. https://doi.org/10.1002/cpt.2149

Duarte, J. D., & Cavallari, L. H. (2021). Pharmacogenetics to guide cardiovascular drug therapy. Nature Reviews Cardiology, 18(9), 649–665. https://doi.org/10.1038/s41569-021-00549-w

Empey, P. E., Karnes, J. H., & Johnson, J. A. (2025). Pharmacogenetic variation and clinical implementation: Roadmap to adoption. Annual Review of Pharmacology and Toxicology, 65, 111–130. https://doi.org/10.1146/annurev-pharmtox-061724-080718

García-Alfonso, P., Saiz-Rodríguez, M., Mondéjar, R., Salazar, J., Páez, D., Borobia, A. M., Safont, M. J., García-García, I., Colomer, R., García-González, X., Herrero, M. J., López-Fernández, L. A., & Abad-Santos, F. (2022). Consensus of experts from the Spanish Pharmacogenetics and Pharmacogenomics Society and the Spanish Society of Medical Oncology for the genotyping of DPYD in cancer patients who are candidates for treatment with fluoropyrimidines. Clinical and Translational Oncology, 24, 483–494. https://doi.org/10.1007/s12094-021-02708-4

Kabbani, D., Akika, R., Wahid, A., Daly, A. K., Cascorbi, I., & Zgheib, N. K. (2023). Pharmacogenomics in practice: A review and implementation guide. Frontiers in Pharmacology, 14, 1189976. https://doi.org/10.3389/fphar.2023.1189976

Matic, M., Nijenhuis, M., Soree, B., de Boer-Veger, N. J., Buunk, A. M., Houwink, E. J. F., Mulder, H., Rongen, G. A. P. J. M., Weide, J. V., Wilffert, B., Swen, J. J., Guchelaar, H. J., Deneer, V. H. M., & van Schaik, R. H. N. (2022). Dutch Pharmacogenetics Working Group (DPWG) guideline for the gene-drug interaction between CYP2D6 and opioids (codeine, tramadol and oxycodone). European Journal of Human Genetics, 30(10), 1105–1113. https://doi.org/10.1038/s41431-021-00920-y

Omran, S., Gan, S. H., & Teoh, S. L. (2025). Pharmacogenomics in drug therapy: Global regulatory guidelines for managing high-risk drug reactions. European Journal of Human Genetics, 34, 27–36. https://doi.org/10.1038/s41431-025-01950-6

Pirmohamed, M. (2024). Pharmacogenomics: Current status and future perspectives. Nature Reviews Genetics, 25, 350–362. https://doi.org/10.1038/s41576-022-00572-8

Principi, N., Petropulacos, K., & Esposito, S. (2023). Impact of pharmacogenomics in clinical practice. Pharmaceuticals, 16(11), 1596. https://doi.org/10.3390/ph16111596

Swen, J. J., Van der Wouden, C. H., Manson, L. E., Abdullah-Koolmees, H., et al. (2023). A 12-gene pharmacogenetic panel to prevent adverse drug reactions: An open-label, multicentre, controlled, cluster-randomised crossover implementation study. The Lancet, 401(10374), 347–356. https://doi.org/10.1016/S0140-6736(22)01841-4

Tayeh, M. K., Gaedigk, A., Goetz, M. P., Klein, T. E., Lyon, E., McMillin, G. A., Rentas, S., Shinawi, M., Pratt, V. M., & Scott, S. A. (2022). Clinical pharmacogenomic testing and reporting: A technical standard of the American College of Medical Genetics and Genomics (ACMG). Genetics in Medicine, 24(4), 759–768. https://doi.org/10.1016/j.gim.2021.12.012

Tremmel, R., Hübschmann, D., Schaeffeler, E., Pirmann, S., Fröhling, S., & Schwab, M. (2024). Innovation in cancer pharmacotherapy through integrative consideration of germline and tumor genomes. Pharmacological Reviews, 77(1). https://doi.org/10.1124/pharmrev.124.001049

Wielandt, A. M., Moreno, M., & Ortiz, L. (2022). Uso de la farmacogenética como herramienta de precisión en psiquiatría: Hacia una medicina personalizada. Revista Médica Clínica Las Condes, 33(2), 163–173. https://doi.org/10.1016/j.rmclc.2022.03.007

Published

2026-09-01

How to Cite

Galarza-Galarza, C. K., Barrezueta-Román, R. V., Flores-Paucar, P. S., & Guilcapi-Baldeón, B. B. (2026). Pharmacogenetics in clinical practice: a systematic review. Revista Científica Episteme & Praxis, 4(3), 64–70. https://doi.org/10.62451/rep.v4i3.206